Open Source Heartbeat: Open Source Heartbeat

Open Source Heartbeat

jedbrown commented on issue rsmpi/rsmpi#152.

BorrowedBuf as in read_buf is an alternative interface, though we would need to make our own generic version (preferably in a separate crate)….

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vsoch commented on issue pydicom/deid#280.

I can give a suggestion for a strategy to take - if you have very specific, scoped fields you want to keep, you can use the KEEP directive. If it’s more a global thing a strategy akin to the reverse remove_private_tags might make sense….

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vsoch commented on issue google/dranet#151.

> I’d like to see an example of this at work, i.e spin up a pod with a resource request and see that the RDMA device gets properly mounted to the pod. Since a lot of that logic depends on NIC devices there may need to be some work done there for proper allocation/release of the device from the host to the pod. …

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garlick open issue garlick/brewcop#20.

add deb packaging

Problem: running out of a git tree is amateur hour. Add a make target to create a binary deb and install that….View Comment

grondo commented on issue flux-framework/flux-core#6909.

To summarize offline debugging, it was discovered via running rpm --verify that /etc/flux/rc1 and /etc/flux/rc3 had been modified by configuration management and thus the system was running with v0.74.0 with the rc scripts from v0.71.0. This caused the sdmon modules to not be loaded, so the instance was stuck waiting for sdmon to check in….

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gardner48 commented on issue LLNL/sundials#702.

@emprice Thanks for reporting this problem. I’ve modified one of our examples using inequality constraints and was able to reproduce similar behavior where the step size is increased rather than cut when a constraint violation is found. This occurs when the predictor and corrector both produce states that do not satisfy the inequality constraint. In this case the computation used to estimate the step size needed to satisfy the constraint is invalid. There are a couple ways to address this. I’ll discuss this we the rest of a team and update this issue when I’ve added a fix….

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artv3 commented on issue LLNL/raja-suite-tutorial#40.

I think we can close this PR, we have decided to leave this lesson out of the intro tutorial. …

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cmelone commented on issue LLNL/hubcast#145.

the handlers and clients have names like GitLabSrcClientFactory and GitLabSrcHandler. I haven’t changed the destination equivalents yet, or GitHub classes if there’s a more attractive option available…

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gardner48 commented on issue AMReX-Microelectronics/FerroX#72.

Requires updates to the AMReX SUNDIALS interface in AMReX-codes/amrex#4562…

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JustinPrivitera closed issue visit-dav/visit#20140.

session file save doesn't take session file names in directory into account

visit 3.4.2 beta …View Comment

cyrush commented on issue visit-dav/visit#20472.

I think I know the issue with the vtkm unstructured grid, its not the coordinates. …

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markcmiller86 commented on issue visit-dav/visit#20461.

@Sam-Briney I just wanted to reach out and ask if you might know if you have any automated scripting or some other such activity that is routinely pulling down LFS content in the visit-dav/visit repo? We’ve run into some odd issues regarding our lfs bandwidth quota and I am just trying to investigate….

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tgamblin commented on issue spack/spackbot#109.

Spackbot can only request reviews from people in the spack organization. @arezaii and @bonachea are in the Spack organization – specifically they are part of the maintainers team that Spackbot invites org members to….

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tgamblin commented on issue spack/spack-tutorial#456.

thanks!…

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adrienbernede commented on issue spack/spack#49771.

@becker33 This is the error I am running into….

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astrophpeter commented on issue openjournals/joss-reviews#8147.

Thanks @fruzsinaagocs I have added the missing DOIs and replaced the Tudat reference. https://github.com/LLNL/SSAPy/pull/93 . Please let me know if you would like me make any further changes. …

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tzanio commented on issue mfem/mfem#4928.

This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch….

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v-dobrev commented on issue mfem/mfem#4811.

Re-merged in next for testing……

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imguoguo open issue imguoguo/Comments#42.

garlick open issue flux-framework/flux-core#6912.

make it more obvious when a node is offline due to sdmon

Problem: currently sdmon joins the sdmon.online group only after a node is free of running work,which keeps the scheduler from putting new work on it until it is completely idle. However, there is no indication in flux resource status that this is the reason a node is showing offilne….View Comment

chu11 open issue flux-framework/flux-core#6910.

eventlogger: cap transaction operation count to reasonable cap

Per comment in #6581 (related to #6125) it might be wise to put a cap on the size of transactions coming out of the eventlogger. It present, it could be infinite….View Comment

cmoussa1 commented on issue flux-framework/flux-accounting#686.

Thanks for reviewing this @grondo! I force-pushed up a change to check the return code of flux_jobtap_event_post_pack () as well as added a comment explaining that an error there is not fatal. I’ll go ahead and set MWP here…

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aschaf open issue Parallel-in-Time/parallel-in-time.github.io#952.

New Papers for bibbot!

https://doi.org/10.1016/j.camwa.2024.05.017…View Comment

adrienbernede commented on issue LLNL/radiuss-shared-ci#24.

Pascal was retired on october 2024….

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cyrush commented on issue Alpine-DAV/ascent#1559.

I think we can resolve by modifying the bounds data flow filter tracking logic to provide the bounds per topology instead of one overall set of bounds. The results can be in a conduit node instead of a vtkm::Bounds` object….

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gardner48 commented on issue AMReX-Codes/amrex#4562.

FYI @ajnonaka, various updates I made when testing with FerroX. I’ll open a PR with some corresponding updates on the FerroX side as well….

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becker33 commented on issue spack/spack-tutorial#455.

@tgamblin @kshea21…

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v-dobrev commented on issue spack/spack-packages#143.

I’d like to get the PR that adds MFEM v4.8, #496, merged before this PR. That’s why I’ve been postponing the review of this PR for some time now….

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hppritcha commented on issue open-mpi/ompi#13299.

related to https://github.com/open-mpi/prrte/pull/61 . We need updates to ompi_main branch on prrte fork to get help messages working for prrte help….

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wihobbs commented on issue flux-framework/flux-core#6907.

As for the actual change, looks good to me but we should probably get an approval from @garlick….

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benzwick commented on issue Slicer/SlicerBuildEnvironment#25.

It looks good to me too. Thank you so much for helping with this….

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alecbcs commented on issue spack/spack-packages#507.

I use labeler in other projects, but it doesn’t support tags that come from the patch of the PR. For example, we should have update-package but we couldn’t have new-version because it only looks at the file modified….

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tgamblin commented on issue spack/spack#50972.

> Is saving the compiler wrapper output (Spack debug logs) in the same directory as spack-build-out.txt easy to implement?…

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hppritcha commented on issue open-mpi/prrte#52.

closing this for now. we can reopen if need be….

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hppritcha commented on issue mpi-forum/pympistandard#30.

@jsquyres @wesbland please review…

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homeomorfismo commented on issue mfem/mfem#4926.

@tzanio yes!…

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jedbrown commented on issue RDycore/RDycore#295.

Does one need gradients or integrals, or only point samples of the solution field from the mesh without interpolation?…

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becker33 commented on issue LLNL/uberenv#142.

I think @cyrush ‘s suggestion is probably better – you could still technically create a situation that required cleaning the bootstrap, but by far the most likely reason is two different versions of Spack trying to use the same bootstrap store….

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emily-howell closed issue Alpine-DAV/ascent#1275.

replay parallel multi-timestep mode

given mpi env, split into sub coms and run parallel in time actions as well as dist-memory parallel. …View Comment

becker33 commented on issue spack/spack-packages#53.

@scottstraughan is there any mechanism other than a file in the intel-oneapi-compilers prefix for oneapi to know where to look for plugins? Anything equivalent to the PYTHONPATH variable for python searching for python modules?…

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v-dobrev commented on issue spack/spack#49871.

Migrated to https://github.com/spack/spack-packages/pull/496….

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uvilla commented on issue pecos/tps#306.

Sounds good. …

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garlick commented on issue garlick/brewcop#5.

Yeah we don’t have those modes anymore, so closing….

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vsoch commented on issue rootless-containers/usernetes#373.

We got this working. I wish I could report why - it started working on a restart to the cluster. My suspicion is that the admin didn’t have all the kernel modules loaded that we need, but I don’t know….

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imguoguo commented on issue osbuild/bootc-image-builder#963.

> Fwiw, I submited an RFC patch to the qemu-devel mailinglist that return “0” unconditionally for the set_robust_list() syscall. When I do this locally the podman locking works so I’m 90% confident that it solves the problem. I have no sense in how likely it is that the patch gets accepted though (my guess is not very likely), its arguably wrong but also in practice glibc does not care - it is a risk for non-glibc threading implementations though which would be a good reason to reject it (otoh most languages like rust/java use glibc it seems, go does not use set_robust_list and musl https://git.musl-libc.org/cgit/musl/tree/src/thread/pthread_mutex_trylock.c#n30 also does not check the return code ] …

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vsoch commented on issue google/dranet#150.

Lost my allocation

uvilla commented on issue pecos/tps#306.

Another options could have been using MPI gatherv to handle all the …

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hppritcha commented on issue open-mpi/ompi#13321.

@cpshereda could someone from Cornelis provide a list of sanity checks to run to verify an OPA network is correctly set up?…

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tomstitt commented on issue mfem/mfem#4918.

@camierjs already did this in https://github.com/mfem/mfem/pull/4899 =]…

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tzanio commented on issue mfem/mfem#4898.

Merged in next for testing……

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v-dobrev commented on issue mfem/mfem#4899.

Merged in next for testing……

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artv3 commented on issue mfem/mfem#4913.

Can we update the branch with main? I would like to try it, but I need the latest and greatest. …

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imguoguo open issue imguoguo/Comments#40.

grondo commented on issue flux-framework/flux-core#6898.

@wihobbs: if you approve I’ll go ahead and set MWP here….

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BradWhitlock commented on issue LLNL/axom#1440.

This code does not compile anymore due to a static_assert so I’m closing it….

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jeremylt commented on issue CEED/libCEED#1850.

If a user is bypassing our access model, there’s nothing we can do about that. It will always be a bug….

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cyrush commented on issue Alpine-DAV/ascent#1552.

win2025 it is….

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astrophpeter commented on issue openjournals/joss-reviews#8147.

Thanks both. @athulpg007 we just added some more examples. @andrea-sesta we’re working on updating the JOSS paper text again. Could you please let me know of any more outstanding items we need to take care of for the review? …

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jameshcorbett commented on issue flux-framework/flux-sched#1372.

Another user reported this on Tuo:…

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garlick commented on issue flux-framework/flux-coral2#376.

Fixed that - thanks! I’ll set MWP…

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artv3 open issue LLNL/raja-suite-tutorial#43.

Update View lesson

Use the “make_permuted_view” methods. …View Comment

adayton1 commented on issue LLNL/Umpire#956.

Sorry for all the nitpicks. A lot of these changes have user-facing error messages, which is why I’m being a little pedantic….

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adrienbernede commented on issue LLNL/RAJA#1859.

- [x] Merge change in RSC: https://github.com/LLNL/radiuss-spack-configs/pull/133 …

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cyrush commented on issue visit-dav/visit#20449.

We should see if this happens with vtk 9.5 since the rendering paths will be different….

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tpatki commented on issue kokkos/kokkos-tools#295.

Hi @ethan-puyaubreau …

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chu11 commented on issue flux-framework/flux-core#6798.

removed WIP, now that #6772 has been merged…

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grondo commented on issue flux-framework/flux-accounting#682.

I wonder if this error is the problem: …

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cmoussa1 commented on issue flux-framework/flux-accounting#682.

No, not a problem. I opened this PR mostly as an experiment to see if removing the duplicate coverage.rc that I had in flux-accounting’s checks_run.sh (I think due to my my negligence in #644) would actually trigger the Python bindings from actually getting picked up by Codecov, but I’m still not seeing coverage there.

camierjs commented on issue mfem/mfem#4899.

> This looks good to me. It builds a few heavy libraries (including libcxx), but they are cached and preserved between individual runs right? …

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wihobbs open issue flux-framework/flux-pmix#112.

install instructions

On almost every framework project, we have runes to build from source in the README, but they seem to have been left off for flux-pmix. …View Comment

wihobbs commented on issue flux-framework/flux-core#6898.

As I looked deeper in to it, I realized it’s not a problem as I thought it would be. I was expecting we’d have several places where the phrase “job environments for Jobspecs created in Python have an empty environment by default” would show up, but that proved not to be true….

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trws commented on issue flux-framework/flux-core#6704.

That sounds right, we could probably get away with a replace op for this one. Maybe allow updates to job.update.<json-patch-path-root> so you could do (I forget the exact path, but something like) job.update./attributes/dependencies to allow updates to it. Depending on how granular we want the control to be that might not be quite right but it would make it easy to allow updates to specific roots of the jobspec, or even restrict it to specific array members if we ever needed to….

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balos1 commented on issue LLNL/sundials#736.

FS permissions should be fixed too…

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adrienbernede open issue LLNL/radiuss-shared-ci#45.

Add support for Caliper performance data collection

We want shared pipeline to offer the option to produce performance reports for projects which have implemented Caliper instrumentation….View Comment

JustinPrivitera commented on issue visit-dav/visit#20154.

Can we reschedule this ticket for a later release now that we have addressed mili?…

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v-dobrev commented on issue mfem/mfem#4757.

Re-merged in next for testing……

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tzanio commented on issue mfem/mfem#4909.

This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch….

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trws commented on issue flux-framework/flux-core#6704.

The first thing that went through my mind on this is we could use json patch formatted content. Jansson doesn’t support it natively, but there are examples around the internet for supporting it with anything that has a json_pointer_set or similar. There are a number of tools that can work with or produce it, like a diff output for json in general, so it would likely end up useful other places too. …

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balos1 commented on issue LLNL/sundials#732.

I found a workaround with the generator, so this is not needed anymore….

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cmelone open issue LLNL/hubcast#146.

Add tests

## What would success / a fix look like?…View Comment

BradWhitlock commented on issue LLNL/axom#970.

I added ArrayView::fill() in an earlier PR so I’ll finish this one….

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tpatki commented on issue spack/spack-packages#148.

@slabasan …

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vsoch commented on issue singularityhub/singularity-hpc#670.

If you have interest! I didn’t comment because it’s marked as a Draft. Let me know when it’s ready for review….

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jedbrown commented on issue rsmpi/rsmpi#209.

Closing in favor of #214 …

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jeremylt commented on issue openjournals/joss-reviews#8467.

I would be interested in reviewing, as long as me being out for travel for a couple of weeks in Jul and Aug isn’t a problem for the review timeline….

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grondo commented on issue flux-framework/flux-core#6774.

Also forgot to mention that this now has support for a module priority value. Module alternatives are sorted first by priority then by load order, so the last module configured gets preference if priorities are the same. The default priority is 100, and sched-simple has a configured priority of 50. …

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jameshcorbett commented on issue flux-framework/flux-coral2#373.

Looks like a transient error, it’s passing now! Setting MWP….

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vsoch open issue flannel-io/flannel#2254.

bug: br_netfilter requirement prevents startup - not required in user space container

This is similar to https://github.com/flannel-io/flannel/issues/2068, but a different environment….View Comment

jedbrown commented on issue Tehforsch/diman#91.

I just wanted to share this update from the const generics group lead:…

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adayton1 commented on issue LLNL/spheral#258.

> @adayton1 is this something you’re still working on / planning to work on in the near future? …

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JustinPrivitera open issue LLNL/conduit#1449.

Issue writing files on Windows

see https://github.com/visit-dav/visit/issues/20456…View Comment

cyrush commented on issue LLNL/conduit#1447.

:-) …

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markcmiller86 commented on issue LLNL/Silo#448.

FYI, if you have a chance, see #450….

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jeremylt commented on issue CEED/libCEED#1847.

Note to me - bump Ratel CI on Monday…

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cyrush commented on issue Alpine-DAV/ascent#1571.

This work builds off @nicolemarsaglia’s uniform grid sampling work to add sampling at a list of points, or via a line (start, end, and number of samples). …

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vsoch commented on issue zenodo/zenodo#1606.

You know, it’s been enough time this would be a fairly straight forward task for an LLM. As long as you provide it the structure and data you need to populate it….

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becker33 commented on issue spack/spack#50936.

@haampie added…

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jedbrown commented on issue rust-lang/rust#138689.

@wesleywiser :wave: What are the next steps for this PR?…

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vsoch open issue rootless-containers/usernetes#376.

Flannel doesn't see br_netfilter - expected?

Hi @AkihiroSuda. We are testing the latest (current master) of Usernetes, and flannel fails on deployment not seeing br_netfilter….View Comment

vsoch open issue kubernetes-sigs/node-feature-discovery#2185.

Question: how to expose all features?

Hi! I’m hoping this is a simple question to answer. How do I get NFD to expose all labels in Kubernetes? When I install out of the box, there are somewhere are 70 labels, however when you just export the raw features there are close to 10k. I’d like to get all 10K exported for my cluster. An I assume these are a set that were deemed important (but was this experimentally derived)? …View Comment