cbritopacheco commented on issue cbritopacheco/rodin#201.
@copilot+claude-opus-4.6 I have made some fundamental changes to polytope iteration in the library. Namely, I have changed that MPI Mesh polytope iterators return with the MPI Mesh reference, as opposed to before that they returned the shard’s reference. This has a lot of implications in the library. The first one is that XDMF somehow encounters this exception. Please fix it and find other places in the library which should be modified. …
alecbcs commented on issue spack/spack-packages#3931.
Should this package also depend on openjpeg itself?…
tgamblin commented on issue spack/spack#51931.
@johnwparent take a look at the simplifications here, particularly around locking vs. atomic move….
vsoch commented on issue kubeflow/trainer#3325.
@andreyvelich this is ready for review and eventual merge - apologies for my confusing posts! I was testing locally with the wrong container image (I had updated it back to kubeflow for the PR here, and needed to use my custom build). …
gauthier12 open issue jetpax/pycoclaw#3.
Source code
Hi, …View Comment
grondo open issue flux-framework/flux-sched#939.
resources are not scheduled fairly among competing queues of job requests
Problem: when multiple queues are defined, fluxion schedules all jobs in the first queue before looking at the next queue. The queues are thus implicitly prioritized according to the order defined, with no available mechanisms to prevent starvation or ensure progress for all queues. …View Comment
grondo open issue flux-framework/flux-core#4306.
use cases for partition + qos or queues
Here are the basic things that we do with the combination of partitions and qos in Slurm, and just queues in LSF: …View Comment
garlick commented on issue flux-framework/flux-core#4306.
That is almost exactly what was kicking around in my brain. I was internally calling them “vqueues” but external sounds good too….
vsoch commented on issue flux-framework/flux-core#7217.
Go home, codecov, you’re drunk….
vsoch commented on issue flux-framework/Tutorials#57.
This came out great! Since our HPSF tutorial was shorter than anticipated, I recorded the entire thing (AWS, cpu with EFA and GPU) today with a short (2.5 minute) introduction to Flux. It is edited and ready to go, and will be released with the Kubeflow blog announcement….
benzwick commented on issue benzwick/SlicerAdaptiveBrush#4.
Hi @Thanhhuynh9 I tested this on my MacBook and it seems to work now. I will close this issue but please reopen it if you still have problems with installing this extension….
cyrush open issue visit-dav/visit#20871.
anari volume plot issue when general anari rendering support is enabled
### Describe the bug…View Comment
becker33 closed issue spack/spack#45173.
Allow arbitrary packages in module hierarchy
### Summary…View Comment
garlick commented on issue pmodels/mpich#7751.
BTW our two projects are in the Linux Foundation together now. IMHO we should try hard to make Flux and MPICH work great together!…
tzanio commented on issue mfem/mfem#5269.
This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch….
gardner48 commented on issue llnl/sundials#880.
@mottelet was this a duplicate of #753? …
BradWhitlock closed issue llnl/axom#1780.
Resolve conduit memory handling
We currently have 2 ways to use Axom memory in Conduit. They were developed as independent utilities in different efforts. This issue is for discussing how to combine them to remove redundancies….View Comment
chu11 commented on issue flux-framework/flux-core#7448.
> If there are multiple suggestions they should be deduplicated. I’m not sure this will happen in practice, flux-python is installed to /usr/bin so won’t appear as a discovered command in a normal installation….
trws commented on issue flux-framework/flux-core#7451.
I just finally got time to actually read this over. This is a massively more complicated scheduler setup than I expected from the “toy” designation. It’s a very nice addition, especially as a way to let people experiment with new custom schedulers. I’m a bit tempted to make a few adjustments to this to make it work more the way qmanager does from a progress and behavior perspective, it might actually not be all that much of a lift to replace qmanager with a reworked version of the backfill class here. We’d have to do some performance tests and similar, but I’m sorely tempted to give it a shot, especially given some of the features we’ve been discussing for that recently the flexibility would be nice, and it isn’t a compute-bound service either. Do you think we could find some time to chat over this next week @garlick? …
cmoussa1 open issue flux-framework/flux-accounting#829.
idea: emulate fair-share calculation for a given association or hierarchy
While presenting at HPSF this week, I got an interesting question from an attendee about how often we tinker with our various priority factors if we don’t like how job priorities are being calculated. While the answer was pretty straightforward (meaning that we don’t adjust the weights for these factors very often), it did get me thinking about something sort of related… I wonder if it would be useful to be able to simulate how fair-share would be calculated for a hierarchy of banks and associations. Something like loading a sample YAML or JSON file of the relevant association and bank information needed to calculate fair-share and just outputting what the fair-share values would be for the hierarchy….View Comment
jeremylt commented on issue CEED/libCEED#1944.
Ok, I have largely fixed the worst oddities, I think…
cyrush commented on issue Alpine-DAV/ascent#1669.
@aroccaPrediqtt …
JustinPrivitera closed issue visit-dav/visit#20777.
Audit host profiles for release - which ones are out of date?
https://github.com/visit-dav/visit/tree/develop/src/resources/hosts…View Comment
JustinPrivitera closed issue llnl/conduit#1497.
Relax material ordering restriction for material dependent field, specset, and matset style converters
Material dependent field style converters need not present materials in the same order as their associated matset. The same is true of specsets. Yet there is an artificial restriction imposed by the material dependent field and specset style converters….View Comment
jameshcorbett open issue flux-framework/flux-coral2#458.
Rabbits: use a new property to exclusively allocate rabbits
In an offline discussion between @behlendorf @garlick @kkier and Py, we were brainstorming ways to hand the rabbits over to users on El Cap. The primary problem is that El Cap does not have JGF enabled, since slices of JGF stored repeatedly in the KVS for each job will occupy too much storage and memory (see https://github.com/flux-framework/flux-core/discussions/7464 for details)….View Comment
JustinPrivitera commented on issue Alpine-DAV/ascent#1675.
I wrote a converter from polyhedral mixed to mixed (?) in VisIt; perhaps that would be of use here?…
emily-howell commented on issue Alpine-DAV/ascent#1494.
I am having trouble reproducing this bug. There is already a test (https://github.com/Alpine-DAV/ascent/blob/74d78e80f839eb1cace5a48e85aed2696729f584/src/tests/ascent/t_ascent_triggers.cpp#L488) that generally reproduces this .yaml and is passing. Even after modifying it to be an exact match to this .yaml example I was unable to reproduce the bug….
markcmiller86 commented on issue visit-dav/visit#20860.
@JustinPrivitera and @visit-dav/visit-core-team I have now tried to handle hyphenations. …
v-dobrev commented on issue spack/spack-packages#1469.
It looks like CI now requires SHA256 checksum for packages – should be an easy fix. …
v-dobrev open issue mfem/mfem#5275.
cudaErrorInvalidDevice abort in GPU builds due to missing device migration in HypreParMatrix::DropSmallEntries
When running a GPU-accelerated build (CUDA + Thrust), calling HypreParMatrix::DropSmallEntries results in a poisoned CUDA context that causes subsequent device operations to fail with a hardware abort. …View Comment
balos1 closed issue llnl/sundials#844.
Bug in SUNLogger_SetXFilename?
Hi all,…View Comment
adrienbernede commented on issue llnl/radiuss-spack-configs#162.
Interesting issue. So, if I understand correctly, the concretization issue comes from us enforcing a compiler dependency on a package that has none. But when removing the compiler, we lack a constraint to enforce coherency between the compiler / software stack version and the external package version… …
markcmiller86 open issue llnl/Silo#520.
Fix funky line endings
Some of the source files in fpzip and maybe elsewhere have funky line endings. These should be fixed….View Comment
adayton1 commented on issue hypre-space/hypre#1490.
We’ll give it a try!…
jeremylt commented on issue 4C-multiphysics/4C#1870.
Ah, that makes sense. I’d then personally try to create a way to bypass those safeguards and guard that header with warnings…
artv3 commented on issue llnl/RAJAPerf-Benchmark#4.
Looks good to me! …
adrienbernede commented on issue spack/spack-packages#3804.
Changes look good to me. Concretization and build tested internally here: …
trws commented on issue flux-framework/flux-accounting#793.
There are a few more considerations here that hit a couple of different use-cases….
grondo commented on issue flux-framework/flux-core#7453.
> The flux start –test-conf idea is a good one on its own IMHO although certainly scoped wider than the immediate need here and may get a bit tricky in combination with other options and environment variables, whereas flux alloc is a bit more constrained….
jedbrown open issue cu-numpde/spring26#1.
Sign up for community presentations
Please comment here with the name of the software (linked to the website), and a sentence or two about what it does. Please make your repository public [1] and link your proposal.md below. (You are encouraged to comment here as soon as you’ve chosen a package; you can keep working on the proposal.md file.)…View Comment
tomstitt closed issue openai/codex#14672.
bwrap sandbox bind fails with symlinked `TMPDIR`
### What version of Codex CLI is running?…View Comment
adrienbernede commented on issue llnl/radiuss-shared-ci#73.
> You might check if you can build locally– I see a couple of minor formatting issues if I do sphinx-autobuild docs/sphinx docs/_build/html
…
BradWhitlock commented on issue llnl/axom#1780.
I finally ran into the problem that Brian reported when I could not make Bump and MIR use a custom allocator for a memory pool. I am adopting Brian’s approach….
garlick commented on issue flux-framework/flux-core#7453.
Although, on broker attributes, we could do something like add modprobe.* or module.* to the broker attribute list and adopt that as a standard way of selecting alternatives. Less bad that having to add a new one for every new alternative….
cbritopacheco commented on issue cbritopacheco/rodin#188.
@copilot+gpt-5.3-codex I have re-organized the structure. I would like you to: …
JustinPrivitera open issue visit-dav/visit#20862.
Blueprint plugin - give material map to matsets before calling to_silo
Say we have a case like this…View Comment
cyrush commented on issue visit-dav/visit#20857.
Note: LC may remove the broken PySide2 module from their python 3.13 install….
jeremylt commented on issue openjournals/joss-reviews#9153.
This looks interesting and I’m happy to review, but it may take me a bit longer than usual, as I’m about to do a big move. If the timeline is shorter then I’m likely not the best option….
tzanio commented on issue mfem/mfem#5252.
This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch….
adrienbernede commented on issue llnl/Umpire#1056.
@davidbeckingsale This is ready!…
adrienbernede commented on issue llnl/RAJA#1999.
@rhornung67 This is ready!…
adrienbernede commented on issue llnl/Caliper#727.
@daboehme This is ready!…
adrienbernede commented on issue llnl/CHAI#360.
@adayton1 This is ready!…
vsoch open issue kubeflow/trainer#3332.
[feat] Feature requests for Flux Policy
### What you would like to be added?…View Comment
cmoussa1 open issue flux-framework/flux-accounting#827.
database: document centralized database design
A centralized database that collects and potentially pushes data out to smaller, in-memory flux-accounting databases should be well-documented and designed….View Comment
jameshcorbett commented on issue flux-framework/flux-accounting#826.
I’ll hit the button since Mergify won’t auto-merge this (as @grondo noted here https://github.com/flux-framework/flux-coral2/pull/456)…
jeremylt commented on issue CEED/libCEED#1940.
Still getting some artifacts like this misbehavior: …
markcmiller86 commented on issue visit-dav/visit#20856.
I can take a look at that this evening. I am going to be at my father’s …
becker33 commented on issue spack/spack#52059.
Added #52067 for clarity…
gardner48 commented on issue llnl/sundials#875.
Addresses llnl/sundials-private#146…
adayton1 open issue llnl/axom#1815.
primal: Add method for checking if a sphere contains a point
The current method is to check if the signed distance is less than (or equal to?) zero. But there’s probably a faster way avoiding square roots….View Comment
adrienbernede commented on issue llnl/RAJAPerf#651.
@rhornung67 This fix is ready….
adrienbernede commented on issue llnl/CARE#358.
@adayton1 you may merge this PR ;)…
wihobbs open issue flux-framework/flux-core#7440.
enable users of the Python bindings to use `CLIPlugin` and other flags implemented in the base CLI
Currently, the CLIPlugins are only accessible (as the name implies) through the CLI, because they are implemented through argparse arguments. A set of **kwargs that could be passed through our Python jobspec construction functions might help us activate these from Python, and enable some other flags that have implementations that are currently CLI-only….View Comment
chu11 commented on issue flux-framework/flux-core#7442.
> Hm, I wonder if a more useful thing here would be to add a –wait option to flux-update that optionally waits for the update to hit the job eventlog before exiting. This would be useful in testing and perhaps in cases where a user wants to wait until an update has taken effect before proceeding….
JustinPrivitera open issue Alpine-DAV/ascent#1667.
Matset layout type recognition makes faulty assumptions
Here in AddMatSets()…View Comment
cyrush commented on issue Alpine-DAV/ascent#1508.
Moving to 0.10.0, workaround is to define -DCMAKE_CUDA_HOST_COMPILER….
dylan-copeland commented on issue mfem/mfem#5260.
Hi Nuno, thank you for your investigation into this issue. We have the miniapp mfem/miniapps/meshing/phpref.cpp which simply demonstrates the capability of h- and p-refinement in parallel, with random selection of refinements and no use of estimators. As far as I know, estimators have not been developed for use in hp-refinement. The limitations you described for estimators after p-refinement make sense to me, and I agree that more work is needed. I think it would be a useful contribution if you would like to work on this, and I don’t think it would conflict with any existing work. Starting with H1/L2 should be sufficient….
alecbcs closed issue llnl/hubcast#229.
Make python-ldap an optional dependency
There are no wheels available for python-ldap, the build requires certain libraries and compilers to be installed: https://www.python-ldap.org/en/latest/installing.html#build-prerequisites….View Comment
BradWhitlock open issue llnl/RAJA#2004.
Exclusive_scan makes wrong answer for char to int output on HIP.
I have places in my code where I do an exclusive_scan() over a mask and make some offsets from it. I wanted to experiment with making my masks char while leaving the scan output as int or long. I wanted the scan to accumulate using the output type so I passed RAJA::operators::plus<T_out>{} as an argument to the scan. That is enough to make it work for SEQ, OMP, and CUDA. With HIP it does not work and makes some negative offsets once char overflows….View Comment
artv3 commented on issue llnl/RAJA#1970.
@johnbowen42 we usually delete the branch after merge…
bhatele commented on issue hpcgroup/pssg-plots#21.
this branch needs to be rebased…
balos1 commented on issue spack/spack-packages#3768.
@spackbot fix style…
tgamblin commented on issue spack/spack#49673.
This came up on the call with @scheibelp w.r.t. https://github.com/llnl/benchpark/pull/1266. It would need at least a couple updates for post-1.0: …
benzwick open issue ImagingDataCommons/SlicerIDCBrowser#74.
KeyError: '' in collectionSelected when no collection is selected
## Description…View Comment
markcmiller86 closed issue HDFGroup/hdf5#6279.
Problems with ZLIB::ZLIB missing from INTERFACE_LINK_LIBRARIES in installed release target hdf5-shared
Describe the bug…View Comment
btalamini commented on issue llnl/smith#1518.
Pinging @white238 , @ebchin, @lihanyu97 . Any outstanding concerns?…
markcmiller86 commented on issue visit-dav/visit#20852.
So, I fiddled around a bit to figure out how to do this the “right” way in Sphinx and on RTD. …
v-dobrev commented on issue mfem/mfem#4964.
Note: we’ve decided to proceed with the review of PR #5137 which (if approved) will supersede this PR. …
gardner48 commented on issue llnl/sundials#868.
This PR extracts some of the changes from #837 to consistently prefix CMake options with SUNDIALS_…
trws closed issue flux-framework/flux-sched#1433.
src/common/libintern/interner.cpp:125:36: error: no matching member function for call to 'find'
I’m getting a build error trying to build on a SLES 15 SP7 VM….View Comment
JustinPrivitera closed issue llnl/conduit#1535.
add `as_index_t()` to node
cyrush commented on issue llnl/conduit#1536.
Looks good, thanks for adding this! …
markcmiller86 commented on issue llnl/H5Z-ZFP#162.
Thanks so much @brtnfld. I am fine with you merging this. I am on my cell phone at the moment…
grondo commented on issue flux-framework/flux-core#7428.
Thanks! I’ll set MWP and plan to tag a patch release after this….
garlick commented on issue flux-framework/flux-core#7426.
Oh, sorry I missed that on the review too….
wihobbs commented on issue flux-framework/flux-core#7426.
That was just something I tried to see if getting rid of the SLURM_ environment variables would fool it into turning off the expiration watcher (it didn’t). I had the same issue without that flag on there (Edit: I think. I’m not at my computer right now.) (And I’m not sure --export=NONE actually gets rid of those variables anyway
vsoch commented on issue dask/dask-jobqueue#700.
I’m headed to bed, but a quick question I have is how memory is being specified here? Flux does not have any flags for controlling / requesting memory….
cyrush open issue visit-dav/visit#20851.
recipe for running visit in codex sandbox
Folks want to use tools like visit within a codex sandbox….View Comment
trws commented on issue spack/spack-packages#3676.
I should have thought to put all of these in here to begin with, and am all for it….
tzanio open issue mfem/mfem#5260.
Error estimates after p-refinement
Hi,…View Comment
balos1 open issue llnl/sundials#844.
Bug in SUNLogger_SetXFilename?
Hi all,…View Comment
trws commented on issue llnl/camp#195.
If std::array from both libc++ and libstdc++ work in device code I would be fine with that, but last I knew neither of them did. Has that changed?…
adrienbernede commented on issue llnl/RAJA#1999.
@rhornung67 would you like to test both …
garlick commented on issue flux-framework/rfc#452.
One other point: @trws’s idea of using JSONL to break up R into separate KVS keys might be…
chu11 commented on issue flux-framework/flux-core#7403.
re-pushed, now up to 3 similar commands will be output. …
garlick commented on issue flux-framework/flux-coral2#455.
Fixed that and will set MWP - thanks!…
wihobbs commented on issue flux-framework/flux-accounting#823.
Cool. We should let the sysadmins know to ignore that message in flux dmesg though, because it shows up about once per hour….
cmoussa1 commented on issue flux-framework/flux-accounting#823.
As far as I know, this isn’t preventing job submissions from regular users, and the instance owner data will still have its max_sched_jobs property in the jobtap plugin initialized to INT16_MAX, so I think it should be okay to hold off until the next regular release….
jeremylt commented on issue CEED/libCEED#1935.
We should probably update the noether-asan job in .gitlab-ci.yml to be more aggressive about warnings…