Open Source Heartbeat: Open Source Heartbeat

Open Source Heartbeat

grondo commented on issue flux-framework/flux-core#7453.

> The flux start –test-conf idea is a good one on its own IMHO although certainly scoped wider than the immediate need here and may get a bit tricky in combination with other options and environment variables, whereas flux alloc is a bit more constrained….

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tomstitt closed issue openai/codex#14672.

bwrap sandbox bind fails with symlinked `TMPDIR`

### What version of Codex CLI is running?…View Comment

adrienbernede commented on issue llnl/radiuss-shared-ci#73.

> You might check if you can build locally– I see a couple of minor formatting issues if I do sphinx-autobuild docs/sphinx docs/_build/html

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BradWhitlock commented on issue llnl/axom#1780.

I finally ran into the problem that Brian reported when I could not make Bump and MIR use a custom allocator for a memory pool. I am adopting Brian’s approach….

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garlick commented on issue flux-framework/flux-core#7453.

Although, on broker attributes, we could do something like add modprobe.* or module.* to the broker attribute list and adopt that as a standard way of selecting alternatives. Less bad that having to add a new one for every new alternative….

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cbritopacheco commented on issue cbritopacheco/rodin#188.

@copilot+gpt-5.3-codex I have re-organized the structure. I would like you to: …

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JustinPrivitera open issue visit-dav/visit#20862.

Blueprint plugin - give material map to matsets before calling to_silo

Say we have a case like this…View Comment

cyrush commented on issue visit-dav/visit#20857.

Note: LC may remove the broken PySide2 module from their python 3.13 install….

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jeremylt commented on issue openjournals/joss-reviews#9153.

This looks interesting and I’m happy to review, but it may take me a bit longer than usual, as I’m about to do a big move. If the timeline is shorter then I’m likely not the best option….

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tzanio commented on issue mfem/mfem#5252.

This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch….

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adrienbernede commented on issue llnl/Umpire#1056.

@davidbeckingsale This is ready!…

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adrienbernede commented on issue llnl/RAJA#1999.

@rhornung67 This is ready!…

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adrienbernede commented on issue llnl/Caliper#727.

@daboehme This is ready!…

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adrienbernede commented on issue llnl/CHAI#360.

@adayton1 This is ready!…

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vsoch open issue kubeflow/trainer#3332.

[feat] Feature requests for Flux Policy

### What you would like to be added?…View Comment

cmoussa1 open issue flux-framework/flux-accounting#827.

database: document centralized database design

A centralized database that collects and potentially pushes data out to smaller, in-memory flux-accounting databases should be well-documented and designed….View Comment

jameshcorbett commented on issue flux-framework/flux-accounting#826.

I’ll hit the button since Mergify won’t auto-merge this (as @grondo noted here https://github.com/flux-framework/flux-coral2/pull/456)…

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jeremylt commented on issue CEED/libCEED#1940.

Still getting some artifacts like this misbehavior: …

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markcmiller86 commented on issue visit-dav/visit#20856.

I can take a look at that this evening. I am going to be at my father’s …

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becker33 commented on issue spack/spack#52059.

Added #52067 for clarity…

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gardner48 commented on issue llnl/sundials#875.

Addresses llnl/sundials-private#146…

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adayton1 open issue llnl/axom#1815.

primal: Add method for checking if a sphere contains a point

The current method is to check if the signed distance is less than (or equal to?) zero. But there’s probably a faster way avoiding square roots….View Comment

adrienbernede commented on issue llnl/RAJAPerf#651.

@rhornung67 This fix is ready….

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adrienbernede commented on issue llnl/CARE#358.

@adayton1 you may merge this PR ;)…

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wihobbs open issue flux-framework/flux-core#7440.

enable users of the Python bindings to use `CLIPlugin` and other flags implemented in the base CLI

Currently, the CLIPlugins are only accessible (as the name implies) through the CLI, because they are implemented through argparse arguments. A set of **kwargs that could be passed through our Python jobspec construction functions might help us activate these from Python, and enable some other flags that have implementations that are currently CLI-only….View Comment

chu11 commented on issue flux-framework/flux-core#7442.

> Hm, I wonder if a more useful thing here would be to add a –wait option to flux-update that optionally waits for the update to hit the job eventlog before exiting. This would be useful in testing and perhaps in cases where a user wants to wait until an update has taken effect before proceeding….

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JustinPrivitera open issue Alpine-DAV/ascent#1667.

Matset layout type recognition makes faulty assumptions

Here in AddMatSets()View Comment

cyrush commented on issue Alpine-DAV/ascent#1508.

Moving to 0.10.0, workaround is to define -DCMAKE_CUDA_HOST_COMPILER….

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dylan-copeland commented on issue mfem/mfem#5260.

Hi Nuno, thank you for your investigation into this issue. We have the miniapp mfem/miniapps/meshing/phpref.cpp which simply demonstrates the capability of h- and p-refinement in parallel, with random selection of refinements and no use of estimators. As far as I know, estimators have not been developed for use in hp-refinement. The limitations you described for estimators after p-refinement make sense to me, and I agree that more work is needed. I think it would be a useful contribution if you would like to work on this, and I don’t think it would conflict with any existing work. Starting with H1/L2 should be sufficient….

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alecbcs closed issue llnl/hubcast#229.

Make python-ldap an optional dependency

There are no wheels available for python-ldap, the build requires certain libraries and compilers to be installed: https://www.python-ldap.org/en/latest/installing.html#build-prerequisites….View Comment

BradWhitlock open issue llnl/RAJA#2004.

Exclusive_scan makes wrong answer for char to int output on HIP.

I have places in my code where I do an exclusive_scan() over a mask and make some offsets from it. I wanted to experiment with making my masks char while leaving the scan output as int or long. I wanted the scan to accumulate using the output type so I passed RAJA::operators::plus<T_out>{} as an argument to the scan. That is enough to make it work for SEQ, OMP, and CUDA. With HIP it does not work and makes some negative offsets once char overflows….View Comment

artv3 commented on issue llnl/RAJA#1970.

@johnbowen42 we usually delete the branch after merge…

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bhatele commented on issue hpcgroup/pssg-plots#21.

this branch needs to be rebased…

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balos1 commented on issue spack/spack-packages#3768.

@spackbot fix style…

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tgamblin commented on issue spack/spack#49673.

This came up on the call with @scheibelp w.r.t. https://github.com/llnl/benchpark/pull/1266. It would need at least a couple updates for post-1.0: …

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benzwick open issue ImagingDataCommons/SlicerIDCBrowser#74.

KeyError: '' in collectionSelected when no collection is selected

## Description…View Comment

markcmiller86 closed issue HDFGroup/hdf5#6279.

Problems with ZLIB::ZLIB missing from INTERFACE_LINK_LIBRARIES in installed release target hdf5-shared

Describe the bugView Comment

btalamini commented on issue llnl/smith#1518.

Pinging @white238 , @ebchin, @lihanyu97 . Any outstanding concerns?…

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markcmiller86 commented on issue visit-dav/visit#20852.

So, I fiddled around a bit to figure out how to do this the “right” way in Sphinx and on RTD. …

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v-dobrev commented on issue mfem/mfem#4964.

Note: we’ve decided to proceed with the review of PR #5137 which (if approved) will supersede this PR. …

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gardner48 commented on issue llnl/sundials#868.

This PR extracts some of the changes from #837 to consistently prefix CMake options with SUNDIALS_

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trws closed issue flux-framework/flux-sched#1433.

src/common/libintern/interner.cpp:125:36: error: no matching member function for call to 'find'

I’m getting a build error trying to build on a SLES 15 SP7 VM….View Comment

JustinPrivitera closed issue llnl/conduit#1535.

add `as_index_t()` to node

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cyrush commented on issue llnl/conduit#1536.

Looks good, thanks for adding this! …

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markcmiller86 commented on issue llnl/H5Z-ZFP#162.

Thanks so much @brtnfld. I am fine with you merging this. I am on my cell phone at the moment…

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grondo commented on issue flux-framework/flux-core#7428.

Thanks! I’ll set MWP and plan to tag a patch release after this….

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garlick commented on issue flux-framework/flux-core#7426.

Oh, sorry I missed that on the review too….

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wihobbs commented on issue flux-framework/flux-core#7426.

That was just something I tried to see if getting rid of the SLURM_ environment variables would fool it into turning off the expiration watcher (it didn’t). I had the same issue without that flag on there (Edit: I think. I’m not at my computer right now.) (And I’m not sure --export=NONE actually gets rid of those variables anyway

vsoch commented on issue dask/dask-jobqueue#700.

I’m headed to bed, but a quick question I have is how memory is being specified here? Flux does not have any flags for controlling / requesting memory….

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cyrush open issue visit-dav/visit#20851.

recipe for running visit in codex sandbox

Folks want to use tools like visit within a codex sandbox….View Comment

trws commented on issue spack/spack-packages#3676.

I should have thought to put all of these in here to begin with, and am all for it….

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tzanio open issue mfem/mfem#5260.

Error estimates after p-refinement

Hi,…View Comment

balos1 open issue llnl/sundials#844.

Bug in SUNLogger_SetXFilename?

Hi all,…View Comment

trws commented on issue llnl/camp#195.

If std::array from both libc++ and libstdc++ work in device code I would be fine with that, but last I knew neither of them did. Has that changed?…

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adrienbernede commented on issue llnl/RAJA#1999.

@rhornung67 would you like to test both …

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garlick commented on issue flux-framework/rfc#452.

One other point: @trws’s idea of using JSONL to break up R into separate KVS keys might be…

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chu11 commented on issue flux-framework/flux-core#7403.

re-pushed, now up to 3 similar commands will be output. …

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garlick commented on issue flux-framework/flux-coral2#455.

Fixed that and will set MWP - thanks!…

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wihobbs commented on issue flux-framework/flux-accounting#823.

Cool. We should let the sysadmins know to ignore that message in flux dmesg though, because it shows up about once per hour….

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cmoussa1 commented on issue flux-framework/flux-accounting#823.

As far as I know, this isn’t preventing job submissions from regular users, and the instance owner data will still have its max_sched_jobs property in the jobtap plugin initialized to INT16_MAX, so I think it should be okay to hold off until the next regular release….

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jeremylt commented on issue CEED/libCEED#1935.

We should probably update the noether-asan job in .gitlab-ci.yml to be more aggressive about warnings…

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jeremylt open issue 4C-multiphysics/4C#1823.

Install Inquiries

Hello, I had a couple of questions come up as I was installing 4C. I’ll list them below…View Comment

becker33 closed issue spack/spack-packages#3572.

Installation issue: aocl-dlp missing header numa.h

### Steps to reproduce the issue…View Comment

becker33 closed issue spack/permissions-test-repo#6.

Test team mentions

@spack/test-team-features Testing that this notifies all members of the team….View Comment

adayton1 commented on issue llnl/camp#194.

I’m actually wondering if we should remove camp::array since we should be able to use std::array in device code now that we require c++17 (almost everything in std::array is constexpr in c++17, and everything is constexpr in c++20). With nvcc you have to supply the --expt-relaxed-constexpr flag, which will make all constexpr function __host__ __device__, but with amdclang, constexpr automatically implies __host__ __device__….

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artv3 commented on issue llnl/RAJAPerf#628.

@MrBurmark I pushed up style changes based on your review, do you have time to take a look?…

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adayton1 commented on issue llnl/RAJA#1999.

I was under the impression that codes should be using rocm 6.4.2 or 6.4.3 with cray-mpich 8.1.33 or 9.0.1 in production and that LC wants us to start testing out rocm 7.2.0 with cray-mpich 9.1.0 to determine if there are any problems. So I think both combinations are important (6.4.3 + 9.0.1 and 7.2.0 + 9.1.0). …

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jameshcorbett commented on issue flux-framework/flux-coral2#452.

> I should test this first, but I think a way this could work is to keep the rabbits disjoint from any queue. Then a jobtap or frobnicator plugin could add the equivalent of or rabbit to the constraint object after the queue constraint has been applied. Since the full constraint would then be ((user constraint) and (queue constraint)) or rabbit, the scheduler should be able to select resources from the typical queue+user constraint plus any rabbits….

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benzwick commented on issue SystoleOS/guix-systole#102.

Thanks @RafaelPalomar and thanks @DavinhDang for testing this….

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vladotomov commented on issue CEED/Laghos#208.

@amroakmal @rfhaque I’m not sure what’s the purpose here, but keep in mind that the code in /serial has not been kept in sync with the top directory for a long time. How are you using this and do you expect it to behave the same way as the baseline parallel Laghos?…

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alecbcs commented on issue spack/spack-packages#1257.

@LinaMuryanto as a temporary work around to the failing build I was able to fix my build with ~python since I wasn’t interested with the python bindings…

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tgamblin closed issue hpsfoundation/foundation#2.

Broken link/pdf

The participation agreement link in the README is broken. Also, there is a problem with the hpsf-participation-agreement.pdf file as it says “Error rendering embedded code” “Invalid PDF” when I try to view it (in GitHub)….View Comment

brendankeith commented on issue mfem/web#305.

> These are awesome, thank you so much!

v-dobrev commented on issue mfem/mfem#5255.

Merged in next for testing……

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benzwick commented on issue benzwick/StreamVorti#13.

See #15 …

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cbritopacheco commented on issue cbritopacheco/rodin#176.

@copilot+gpt-5.3-codex Check for correct dimensions usage in the PETSc versions too (i.e. rows and cols)….

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markcmiller86 commented on issue visit-dav/visit#20752.

The boxlib failure appears to be repeatable and has to do with switching between 2D and 3D data. …

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tgamblin commented on issue spack/spack#51982.

On first look at ErrorFormatter, I don’t like this. There are now two places where an error message must be maintained, which can easily go out of sync. …

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cyrush commented on issue visit-dav/visit#20752.

For the blueprint mfem element fields those many not be deterministic across platforms. I will take a look….

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imguoguo closed issue sipeed/picoclaw#805.

[Feature]: Add TUI support via new repository picoclaw_tui

### Description…View Comment

adrienbernede commented on issue llnl/RAJAPerf#642.

@rhornung67 This is ready….

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adrienbernede commented on issue llnl/RAJA#1989.

@rhornung67 This is ready….

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grondo commented on issue flux-framework/flux-sched#1433.

Hm, it should. Note that ./configure is just a wrapper for cmake in this project….

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grondo commented on issue flux-framework/flux-core#7410.

Oh, and one other trivial testsuite fix thrown in….

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vsoch open issue feiskyer/mcp-kubernetes-server#47.

Support for `kubectl explain`

Hi @feiskyer! …View Comment

btalamini closed issue EnzymeAD/Enzyme#2715.

Custom reverse mode rule error

fn:; Function Attrs: mustprogress ssp willreturn memory(readwrite) uwtable(sync)…View Comment

tzanio commented on issue mfem/mfem#5253.

Merged in next for testing……

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cjvogl commented on issue mfem/mfem#5126.

> We should also update the website to mention GSLIB and that we do support GPU builds now. …

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cyrush open issue llnl/Silo#518.

hdf2.0 cmake var issue

https://github.com/llnl/Silo/blob/0cddaa6865fb49ae7b2110fa1b6f2709592abe0b/CMakeLists.txt#L237…View Comment

adayton1 commented on issue llnl/CHAI#359.

> @adayton1 I don’t see the open-source release info anywhere. Was that ever done for CHAI? For example, https://github.com/llnl/RAJA/blob/develop/COPYRIGHT#L6 …

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jeremylt commented on issue CEED/libCEED#1933.

Here is a summary of different open source policies that @jedbrown found: https://blog.probabl.ai/maintaining-open-source-age-of-gen-ai…

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JustinPrivitera open issue visit-dav/visit#20837.

MFEM plot limits not changing is confusing

When you make changes to LOR options in the MultiResControl operator when plotting MFEM data, you expect to see numerical differences in the data extents….View Comment

becker33 commented on issue spack/spack-packages#3505.

Additional things I’ve learned:…

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hppritcha commented on issue open-mpi/ompi#13747.

could we get this cherry picked back to 6.0.x?…

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balos1 closed issue llnl/sundials#820.

2026 SUNDIALS Virtual Birds-of-a-Feather

The SUNDIALS team will be holding a virtual Birds

adrienbernede commented on issue llnl/Umpire#1053.

@davidbeckingsale this is ready for merge….

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adrienbernede commented on issue llnl/Caliper#687.

Merged as part of #712 …

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adrienbernede commented on issue llnl/CHAI#356.

@adayton1 You may ignore the remaining failure status merge: it

cmoussa1 commented on issue flux-framework/flux-core#7408.

Done! Thanks @chu11 …

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chu11 commented on issue flux-framework/flux-core#7408.

As an aside, if this typo was missed by the typo checker, you can submit it to https://github.com/crate-ci/typos/issues/1488. …

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